BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E02LP1|AL426039
(831 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig228 817 0.0
3x_Contig1650 521 e-148
>3x_Contig228
Length = 1440
Score = 817 bits (412), Expect = 0.0
Identities = 419/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 412 aacagaggccatagactacaaggccatggcgatgctaatagaacagtgtccagaaatcag 471
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 aacagaggc-atagactacaaggccatggcgatgctaatagaacagtgtccagaaatcag 1376
Query: 472 caagtctacatgggaattgaaccatagctatttaatcaccttggcaacgttaaagtcact 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 caagtctacatgggaattgaaccatagctatttaatcaccttggcaacgttaaagtcact 1316
Query: 532 agaccaaatgaaacgcatcaaggacaaaagcgtcaagcaactgataaagaccaagttaaa 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 agaccaaatgaaacgcatcaaggacaaaagcgtcaagcaactgataaagaccaagttaaa 1256
Query: 592 agagacaagagatacttgcgtcccgatgttcaaatcgtacgctgatatggtccaatcggt 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 agagacaagagatacttgcgtcccgatgttcaaatcgtacgctgatatggtccaatcggt 1196
Query: 652 tggtaacggcaacaaactactggaaacggtctcatactcaaaactaaccggtgacattgc 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 tggtaacggcaacaaactactggaaacggtctcatactcaaaactaaccggtgacattgc 1136
Query: 712 tactgaaatcacccagatgtcaaaatcaatccgtaacatatagggaactagatatcctat 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 tactgaaatcacccagatgtcaaaatcaatccgtaacatatagggaactagatatcctat 1076
Query: 772 acatactaaacacctgagataccaggcacgtgttacgaacgagacaaaaggaaaaagaaa 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 acatactaaacacctgagataccaggcacgtgttacgaacgagacaaaaggaaaaagaaa 1016
>3x_Contig1650
Length = 11257
Score = 521 bits (263), Expect = e-148
Identities = 263/263 (100%)
Strand = Plus / Minus
Query: 1 gatcttccaatcgttcaccaggtgggacgctatggtggaaacgttgcaaatgtccaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gatcttccaatcgttcaccaggtgggacgctatggtggaaacgttgcaaatgtccaggct 204
Query: 61 attgaacgagaagaaacttgaccaatacaaaccactcattgagagtttgaacacgttcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 attgaacgagaagaaacttgaccaatacaaaccactcattgagagtttgaacacgttcgg 144
Query: 121 cgaaaacaacttccacaacgaaaactggagcgataacagagattttgacatttttggtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 cgaaaacaacttccacaacgaaaactggagcgataacagagattttgacatttttggtac 84
Query: 181 agacgatgtgacccgattccaaacggtgcttgcaccaatccacgtcggtaccaaatggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 agacgatgtgacccgattccaaacggtgcttgcaccaatccacgtcggtaccaaatggtt 24
Query: 241 gaagatcagcattacaagagagt 263
|||||||||||||||||||||||
Sbjct: 23 gaagatcagcattacaagagagt 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5105
Number of Sequences: 1807
Number of extensions: 5105
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 2
length of query: 831
length of database: 10,358,551
effective HSP length: 16
effective length of query: 815
effective length of database: 10,329,639
effective search space: 8418655785
effective search space used: 8418655785
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)